Hi Jeremy!
I've stumbled upon a similar issue with GHA and {curl} installation.
As pointed out in the link you provided, it seems that this issue might be related to a missing dependency: libcurl.
One possible solution would be to explicitly add a step to install this dependency (I just added a step for this in theyaml file you provided):
on:
schedule:
- cron: "35 14 */1 * *" # Every two days at 12:13 AM
jobs:
render-rmarkdown:
runs-on: ubuntu-latest
# optionally use a convenient Ubuntu LTS + DVC + CML image
#container: docker://dvcorg/cml:latest
steps:
- uses: actions/checkout@v3
- name: Setup R
uses: r-lib/actions/setup-r@v2
- name: Install libcurl
run: >
sudo apt-get update && sudo apt-get install --yes
libcurl4-openssl-dev
- name: Setup dependencies
run: |
R -e 'install.packages("remotes")'
R -e 'library(remotes)'
- name: Install system dependencies
if: runner.os == 'Linux'
run: |
while read -r cmd
do
eval sudo $cmd
done < <(Rscript -e 'cat(remotes::system_requirements("ubuntu", "20.04"), sep = "\n")')
- name: Setup Pandoc
uses: r-lib/actions/setup-pandoc@v2
- name: Setup renv
uses: r-lib/actions/setup-renv@v2
- name: Identify and email
#env:
# repo_token: ${{ secrets.GITHUB_TOKEN }}
run: |
Rscript -e 'rmarkdown::render(input = "My_Markdown.Rmd")'
if [[ "$(git status --porcelain)" != "" ]]; then
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "$GITHUB_ACTOR@users.noreply.github.com"
git add *
git commit -m "Auto update Report"
git push origin
Hope this helps!
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