Trying to install metagMisc package using the following
devtools::install_github("vmikk/metagMisc")
#or
remotes::install_github("vmikk/metagMisc")
Error Information:
#Get the following error information for both commands
✓ checking for file ‘/tmp/RtmpM8ALrx/remotes3f285540b216/vmikk-metagMisc-d25b92f/DESCRIPTION’ (352ms)
─ preparing ‘metagMisc’:
✓ checking DESCRIPTION meta-information ...
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ building ‘metagMisc_0.0.4.tar.gz’
- installing source package ‘metagMisc’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error in phy_tree(physeq, errorIfNULL = F) :
could not find function "phy_tree"
Error: unable to load R code in package ‘metagMisc’
Execution halted
ERROR: lazy loading failed for package ‘metagMisc’ - removing ‘/home/vicente/R/x86_64-pc-linux-gnu-library/3.6/metagMisc’
I have phyloseq version 1.30.0 installed using BiocManager 1.30.10
System Information:
- RStudio Edition: Server
- RStudio Version: 1.2.5033
- OS Version: Ubuntu 15.10
- R Version: 3.6.3
#any help with this would be greatly appreciated.