Hello everyone!
Here's my data style, but I won't build a multicomponent violin diagram:
| group |
Clade |
Insertion_Time |
| group2 |
Tork |
853185 |
| group2 |
Athila |
379312 |
| group2 |
Retand |
1130063 |
| group2 |
Tekay |
255525 |
| group2 |
Athila |
239886 |
| group2 |
Ale |
0 |
| group2 |
Ale |
0 |
| group2 |
Ogre |
41610 |
| group2 |
Athila |
431352 |
| group2 |
TAR |
0 |
| group2 |
Ogre |
338127 |
| group2 |
Retand |
372729 |
| group2 |
Ale |
767998 |
| group2 |
Ale |
270223 |
| group2 |
TAR |
36273 |
| group2 |
Ogre |
488782 |
| group2 |
Tekay |
1319446 |
| group2 |
Angela |
473732 |
| group2 |
Retand |
0 |
| group2 |
Tork |
486354 |
| group2 |
Iva0 |
1245755 |
| group2 |
Tekay |
255688 |
| group2 |
Retand |
327799 |
| group2 |
Tork |
494165 |
| group2 |
Tekay |
162057 |
| group2 |
Retand |
477599 |
| group2 |
Ale |
190091 |
| group2 |
Athila |
551171 |
| group2 |
Ogre |
1917981 |
| group2 |
Retand |
593767 |
| group2 |
Tork |
93278 |
| group2 |
Tork |
363996 |
| group2 |
Retand |
1781190 |
| group2 |
Ale |
678763 |
| group2 |
Ale |
213280 |
| group2 |
SIRE |
1247590 |
| group2 |
Ale |
0 |
| group2 |
TAR |
731977 |
| group2 |
Retand |
215069 |
| group2 |
Athila |
24889 |
| group2 |
Ogre |
749291 |
| group2 |
TAR |
120068 |
| group2 |
Athila |
0 |
| group2 |
CRM |
2129153 |
| group2 |
Ogre |
215191 |
| group2 |
Retand |
248248 |
| group2 |
Tekay |
255379 |
| group2 |
Tekay |
68154 |
| group2 |
Tekay |
18533 |
| group2 |
Tork |
0 |
| group2 |
Tekay |
415309 |
| group2 |
TAR |
1749697 |
| group2 |
Athila |
27844 |
| group2 |
Ale |
262836 |
| group2 |
Ale |
0 |
| group2 |
Athila |
312612 |
| group2 |
Ikeros |
398434 |
...
| group4 |
TAR |
1823419 |
| group4 |
SIRE |
0 |
| group4 |
Ale |
252485 |
| group4 |
Retand |
1042084 |
| group4 |
Athila |
0 |
| group4 |
Athila |
361713 |
| group4 |
Athila |
74877 |
| group4 |
Ale |
287386 |
| group4 |
Retand |
666031 |
| group4 |
Athila |
1248786 |
| group4 |
Iva0 |
299702 |
| group4 |
TAR |
51742 |
| group4 |
Athila |
54880 |
| group4 |
Athila |
119843 |
| group4 |
Athila |
481182 |
| group4 |
Tekay |
213428 |
| group4 |
TAR |
572446 |
| group4 |
SIRE |
66218 |
| group4 |
Retand |
188692 |
| group4 |
Retand |
212497 |
| group4 |
Iva0 |
176565 |
| group4 |
Tork |
850561 |
| group4 |
Ogre |
1327321 |
| group4 |
Tekay |
103632 |
| group4 |
CRM |
212104 |
| group4 |
Bianca |
0 |
| group4 |
Ogre |
69321 |
| group4 |
Ale |
1762144 |
| group4 |
CRM |
1354523 |
| group4 |
Retand |
254490 |
| group4 |
Tekay |
48177 |
| group4 |
Tekay |
0 |
| group4 |
CRM |
0 |
| group4 |
Retand |
50853 |
| group4 |
Ale |
276042 |
| group4 |
Ale |
219363 |
| group4 |
Athila |
221896 |
| group4 |
CRM |
0 |
| group4 |
Ale |
148884 |
| group4 |
Angela |
28026 |
| group4 |
Tork |
0 |
| group4 |
Athila |
129182 |
| group4 |
Angela |
206045 |
| group4 |
TAR |
238769 |
| group4 |
CRM |
1364136 |
| group4 |
Iva0 |
281428 |
| group4 |
Tork |
723907 |
| group4 |
Ikeros |
78280 |
| group4 |
Retand |
0 |
| group4 |
Tekay |
0 |
| group4 |
Tork |
303646 |
| group4 |
Ikeros |
394351 |
| group4 |
Athila |
170561 |
| group4 |
Tork |
0 |
| group4 |
Tork |
245240 |
| group4 |
SIRE |
370867 |
| group4 |
Athila |
0 |
| group4 |
CRM |
409171 |
| group4 |
Retand |
918903 |
| group4 |
Galadriel |
2588420 |
| group4 |
Ogre |
170991 |
| group4 |
Iva0 |
352595 |
| group4 |
Athila |
357830 |
| group4 |
Athila |
350554 |
| group4 |
Ogre |
54452 |
| group4 |
TAR |
423770 |
| group4 |
TAR |
123539 |
| group4 |
Ogre |
2004199 |
| group4 |
Athila |
0 |
| group4 |
Tork |
1556622 |
| group4 |
Tekay |
20487 |
| group4 |
Athila |
641308 |
| group4 |
Athila |
24338 |
| group4 |
Ogre |
0 |
| group4 |
Ikeros |
83733 |
| group4 |
SIRE |
164272 |
| group4 |
Athila |
57505 |
| group4 |
Athila |
28760 |
| group4 |
Athila |
274858 |
| group4 |
Ikeros |
1182380 |
| group4 |
Tekay |
645533 |
| group4 |
Tekay |
345856 |
| group4 |
Tekay |
250372 |
| group4 |
Ogre |
554278 |
| group4 |
Ale |
0 |
| group4 |
SIRE |
99987 |
| group4 |
Tekay |
329297 |
| group4 |
Ale |
1113891 |
| group4 |
Ogre |
729401 |
| group4 |
Tork |
795808 |
| group4 |
Ale |
854765 |
| group4 |
Ale |
229850 |
| group4 |
Ogre |
31034 |
| group4 |
Ogre |
1656153 |
| group4 |
Ale |
0 |
| group4 |
Ale |
0 |
| group4 |
CRM |
0 |
| group4 |
Athila |
115298 |
| group4 |
Ale |
173772 |
| group4 |
Athila |
0 |
| group4 |
TAR |
830165 |
| group4 |
Ikeros |
337138 |
| group4 |
Retand |
301111 |
| group4 |
Iva0 |
0 |
| group4 |
Ogre |
1328958 |
| group4 |
Iva0 |
2205055 |
| group4 |
TAR |
274075 |
| group4 |
Ogre |
138328 |
| group4 |
Retand |
0 |
| group4 |
Tekay |
191620 |
| group4 |
Athila |
19843 |
| group4 |
Athila |
318665 |
| group4 |
Athila |
140713 |
| group4 |
Tork |
424606 |
| group4 |
Ale |
1357715 |
| group4 |
Retand |
2887027 |
| group4 |
Ale |
725725 |
| group4 |
Tork |
70919 |
| group4 |
Ogre |
634225 |
| group4 |
Retand |
303966 |
| group4 |
Retand |
210941 |
| group4 |
Ale |
1602976 |
| group4 |
Athila |
30590 |
| group4 |
Athila |
2345184 |
| group4 |
Athila |
508315 |
| group4 |
Athila |
1189707 |
| group4 |
Ale |
656552 |
| group4 |
Ale |
442945 |
| group4 |
Iva0 |
143336 |
| group4 |
Ale |
288463 |
| group4 |
Ogre |
0 |
| group4 |
CRM |
329910 |
...
The number of groups varies from group to group. The final build should look something like this:

I will build a violin diagram for the individual groups, with the code listed below. But I don't know how to fuse the components together.
library(ggplot2)
library(ggsci)
library(hrbrthemes)
library(RColorBrewer)
data <-read.csv("insertion.csv")
insertion.csv
ggplot(data, aes(x = Clade, y = Insertion_Time, col = Clade),
show.legend = F) +
geom_violin() +
geom_boxplot(width = 0.2) +
geom_jitter(width = 0.2, col = "black") +
guides(col = F) -> p
p +
theme( axis.line = element_line(color = "black", size = 0.2),
axis.title = element_text(size = 12),
axis.text = element_text(size = 10),
axis.ticks = element_line(colour = "grey"),
panel.background = element_blank(),
panel.border = element_rect(fill = NA, size = 0.3),
panel.grid.major = element_line(linetype = 2, colour = "grey", size = 0.5),
plot.title = element_text(size = 12, hjust = 0.5)) -> p2
p2
Anyone? Thank you!