How to generate Beta diversity boxplot from phyloseq object?

General
1

Hi !!!
I am working with profiled metagenomic taxonomy abundance data. I want to generate beta diversity (bray-curtis) boxplot from a phyloseq object where two groups (control and test) will be shown. Something like this figure:
r_beta
How can I make it? Can anyone share any code or tutorial?

Thanks,
dpc

2

You may be asking a question in a specialised area where a more focused mailing group may be a a better choice. Have a look at the R lists here https://stat.ethz.ch/mailman/listinfo. There may be one that can help

3

I am not getting where to post the question. Can you tell me?

4

If you follow the link it will take you to the list of R-mailing lists. Pick one that looks promising, click on it and it will take you to a page with a description of the purpose of the mailing list and help you subscribe.

There is no guarantee that there will be suitable one but it is worth a try.
Alternatively, if you are really stuck you could email the package maintainer---listed in the manual--for advice.

5

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