ersion 3.3.2 (2016-10-31) -- "Sincere Pumpkin Patch"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
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> install.packages("glue")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
There is a binary version available but the source version is later:
binary source needs_compilation
glue 1.2.0 1.4.2 TRUE
Binaries will be installed
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/glue_1.2.0.zip'
Content type 'application/zip' length 72364 bytes (70 KB)
downloaded 70 KB
package ‘glue’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\RWAMUCYO YVES\AppData\Local\Temp\RtmpKUdZBC\downloaded_packages
> install.packages("knitr")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
also installing the dependencies ‘magrittr’, ‘stringr’, ‘yaml’, ‘xfun’
There are binary versions available but the source versions are later:
binary source needs_compilation
magrittr 1.5 2.0.1 FALSE
stringr 1.3.0 1.4.0 FALSE
yaml 2.1.18 2.2.1 TRUE
xfun 0.1 0.20 FALSE
knitr 1.20 1.30 FALSE
Binaries will be installed
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/yaml_2.1.18.zip'
Content type 'application/zip' length 185468 bytes (181 KB)
downloaded 181 KB
package ‘yaml’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\RWAMUCYO YVES\AppData\Local\Temp\RtmpKUdZBC\downloaded_packages
installing the source packages ‘magrittr’, ‘stringr’, ‘xfun’, ‘knitr’
trying URL 'https://cran.rstudio.com/src/contrib/magrittr_2.0.1.tar.gz'
Content type 'application/x-gzip' length 265580 bytes (259 KB)
downloaded 259 KB
trying URL 'https://cran.rstudio.com/src/contrib/stringr_1.4.0.tar.gz'
Content type 'application/x-gzip' length 135777 bytes (132 KB)
downloaded 132 KB
trying URL 'https://cran.rstudio.com/src/contrib/xfun_0.20.tar.gz'
Content type 'application/x-gzip' length 99897 bytes (97 KB)
downloaded 97 KB
trying URL 'https://cran.rstudio.com/src/contrib/knitr_1.30.tar.gz'
Content type 'application/x-gzip' length 887652 bytes (866 KB)
downloaded 866 KB
* installing *source* package 'magrittr' ...
** package 'magrittr' successfully unpacked and MD5 sums checked
** libs
*** arch - i386
Warning: running command 'make -f "C:/PROGRA~1/R/R-33~1.2/etc/i386/Makeconf" -f "C:/PROGRA~1/R/R-33~1.2/share/make/winshlib.mk" SHLIB="magrittr.dll" OBJECTS="pipe.o utils.o"' had status 127
ERROR: compilation failed for package 'magrittr'
* removing 'C:/Program Files/R/R-3.3.2/library/magrittr'
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Program Files\R\R-3.3.2\library" C:\Users\RWAMUC~1\AppData\Local\Temp\RtmpKUdZBC/downloaded_packages/magrittr_2.0.1.tar.gz' had status 1
Warning in install.packages :
installation of package ‘magrittr’ had non-zero exit status
* installing *source* package 'xfun' ...
** package 'xfun' successfully unpacked and MD5 sums checked
** libs
*** arch - i386
Warning: running command 'make -f "Makevars" -f "C:/PROGRA~1/R/R-33~1.2/etc/i386/Makeconf" -f "C:/PROGRA~1/R/R-33~1.2/share/make/winshlib.mk" SHLIB="xfun.dll" OBJECTS="base64.o init.o"' had status 127
ERROR: compilation failed for package 'xfun'
* removing 'C:/Program Files/R/R-3.3.2/library/xfun'
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Program Files\R\R-3.3.2\library" C:\Users\RWAMUC~1\AppData\Local\Temp\RtmpKUdZBC/downloaded_packages/xfun_0.20.tar.gz' had status 1
Warning in install.packages :
installation of package ‘xfun’ had non-zero exit status
ERROR: dependency 'magrittr' is not available for package 'stringr'
* removing 'C:/Program Files/R/R-3.3.2/library/stringr'
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Program Files\R\R-3.3.2\library" C:\Users\RWAMUC~1\AppData\Local\Temp\RtmpKUdZBC/downloaded_packages/stringr_1.4.0.tar.gz' had status 1
Warning in install.packages :
installation of package ‘stringr’ had non-zero exit status
ERROR: dependencies 'stringr', 'xfun' are not available for package 'knitr'
* removing 'C:/Program Files/R/R-3.3.2/library/knitr'
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Program Files\R\R-3.3.2\library" C:\Users\RWAMUC~1\AppData\Local\Temp\RtmpKUdZBC/downloaded_packages/knitr_1.30.tar.gz' had status 1
Warning in install.packages :
installation of package ‘knitr’ had non-zero exit status
The downloaded source packages are in
‘C:\Users\RWAMUCYO YVES\AppData\Local\Temp\RtmpKUdZBC\downloaded_packages’
> install.packages(c("class", "cluster", "digest", "glue", "htmltools", "jsonlite", "KernSmooth", "lattice", "markdown", "MASS", "mgcv", "mime", "nnet", "Rcpp", "rlang", "rpart", "spatial", "stringi", "yaml"))
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
also installing the dependency ‘xfun’
There are binary versions available but the source versions are later:
binary source needs_compilation
xfun 0.1 0.20 FALSE
class 7.3-14 7.3-17 TRUE
cluster 2.0.7-1 2.1.0 TRUE
digest 0.6.14 0.6.27 TRUE
glue 1.2.0 1.4.2 TRUE
htmltools 0.3.6 0.5.1 TRUE
jsonlite 1.5 1.7.2 TRUE
KernSmooth 2.23-15 2.23-18 TRUE
lattice 0.20-35 0.20-41 TRUE
markdown 0.8 1.1 TRUE
MASS 7.3-49 7.3-53 TRUE
mgcv 1.8-23 1.8-33 TRUE
mime 0.5 0.9 TRUE
nnet 7.3-12 7.3-14 TRUE
Rcpp 0.12.16 1.0.6 TRUE
rlang 0.2.0 0.4.10 TRUE
rpart 4.1-13 4.1-15 TRUE
spatial 7.3-11 7.3-12 TRUE
stringi 1.1.7 1.5.3 TRUE
yaml 2.1.18 2.2.1 TRUE
Binaries will be installed
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/class_7.3-14.zip'
Content type 'application/zip' length 101322 bytes (98 KB)
downloaded 98 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/cluster_2.0.7-1.zip'
Content type 'application/zip' length 549629 bytes (536 KB)
downloaded 536 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/digest_0.6.14.zip'
Content type 'application/zip' length 173830 bytes (169 KB)
downloaded 169 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/glue_1.2.0.zip'
Content type 'application/zip' length 72364 bytes (70 KB)
downloaded 70 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/htmltools_0.3.6.zip'
Content type 'application/zip' length 617476 bytes (603 KB)
downloaded 603 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/jsonlite_1.5.zip'
Content type 'application/zip' length 1159497 bytes (1.1 MB)
downloaded 1.1 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/KernSmooth_2.23-15.zip'
Content type 'application/zip' length 105037 bytes (102 KB)
downloaded 102 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/lattice_0.20-35.zip'
Content type 'application/zip' length 739515 bytes (722 KB)
downloaded 722 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/markdown_0.8.zip'
Content type 'application/zip' length 168707 bytes (164 KB)
downloaded 164 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/MASS_7.3-49.zip'
Content type 'application/zip' length 1088841 bytes (1.0 MB)
downloaded 1.0 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/mgcv_1.8-23.zip'
Content type 'application/zip' length 2421609 bytes (2.3 MB)
downloaded 2.3 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/mime_0.5.zip'
Content type 'application/zip' length 37483 bytes (36 KB)
downloaded 36 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/nnet_7.3-12.zip'
Content type 'application/zip' length 121914 bytes (119 KB)
downloaded 119 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/Rcpp_0.12.16.zip'
Content type 'application/zip' length 4358189 bytes (4.2 MB)
downloaded 4.2 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/rlang_0.2.0.zip'
Content type 'application/zip' length 754726 bytes (737 KB)
downloaded 737 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/rpart_4.1-13.zip'
Content type 'application/zip' length 925260 bytes (903 KB)
downloaded 903 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/spatial_7.3-11.zip'
Content type 'application/zip' length 154780 bytes (151 KB)
downloaded 151 KB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/stringi_1.1.7.zip'
Content type 'application/zip' length 14289043 bytes (13.6 MB)
downloaded 13.6 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/yaml_2.1.18.zip'
Content type 'application/zip' length 185468 bytes (181 KB)
downloaded 181 KB
package ‘class’ successfully unpacked and MD5 sums checked
package ‘cluster’ successfully unpacked and MD5 sums checked
package ‘digest’ successfully unpacked and MD5 sums checked
package ‘glue’ successfully unpacked and MD5 sums checked
package ‘htmltools’ successfully unpacked and MD5 sums checked
package ‘jsonlite’ successfully unpacked and MD5 sums checked
package ‘KernSmooth’ successfully unpacked and MD5 sums checked
package ‘lattice’ successfully unpacked and MD5 sums checked
package ‘markdown’ successfully unpacked and MD5 sums checked
package ‘MASS’ successfully unpacked and MD5 sums checked
package ‘mgcv’ successfully unpacked and MD5 sums checked
package ‘mime’ successfully unpacked and MD5 sums checked
package ‘nnet’ successfully unpacked and MD5 sums checked
package ‘Rcpp’ successfully unpacked and MD5 sums checked
package ‘rlang’ successfully unpacked and MD5 sums checked
package ‘rpart’ successfully unpacked and MD5 sums checked
package ‘spatial’ successfully unpacked and MD5 sums checked
package ‘stringi’ successfully unpacked and MD5 sums checked
package ‘yaml’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\RWAMUCYO YVES\AppData\Local\Temp\RtmpKUdZBC\downloaded_packages
installing the source package ‘xfun’
trying URL 'https://cran.rstudio.com/src/contrib/xfun_0.20.tar.gz'
Content type 'application/x-gzip' length 99897 bytes (97 KB)
downloaded 97 KB
* installing *source* package 'xfun' ...
** package 'xfun' successfully unpacked and MD5 sums checked
** libs
*** arch - i386
Warning: running command 'make -f "Makevars" -f "C:/PROGRA~1/R/R-33~1.2/etc/i386/Makeconf" -f "C:/PROGRA~1/R/R-33~1.2/share/make/winshlib.mk" SHLIB="xfun.dll" OBJECTS="base64.o init.o"' had status 127
ERROR: compilation failed for package 'xfun'
* removing 'C:/Program Files/R/R-3.3.2/library/xfun'
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Program Files\R\R-3.3.2\library" C:\Users\RWAMUC~1\AppData\Local\Temp\RtmpKUdZBC/downloaded_packages/xfun_0.20.tar.gz' had status 1
Warning in install.packages :
installation of package ‘xfun’ had non-zero exit status
The downloaded source packages are in
‘C:\Users\RWAMUCYO YVES\AppData\Local\Temp\RtmpKUdZBC\downloaded_packages’
I see above you attemping to install the R Package knitr .
It appears to have issue installing xfun. Trying installing from the binaries,
knitrinstall.packages("xfun", type="binary")
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