Installing Tidymodels

General
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1

Dear All,

Is there any trick for installing TidyModels on Ubuntu 18.04? I am facing some errors after trying to install the meta package.

Here is the error:
ERROR: failed to lock directory ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6’ for modifying
Try removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-rstan’
ERROR: dependency ‘rstan’ is not available for package ‘shinystan’

  • removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/shinystan’
    ERROR: dependencies ‘rstan’, ‘shinystan’ are not available for package ‘rstanarm’
  • removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/rstanarm’
    ERROR: dependency ‘rstanarm’ is not available for package ‘tidyposterior’
  • removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/tidyposterior’
    ERROR: dependency ‘tidyposterior’ is not available for package ‘tidymodels’
  • removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/tidymodels’

Here is my SessionInfo()
R version 3.6.2 (2019-12-12)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: elementary OS 5.1 Hera

Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

loaded via a namespace (and not attached):
[1] compiler_3.6.2

Thanks.

2

Have you tried following the error message instructions?

Have you make sure you have write permissions on that folder?

3

Yep. But nothing has changed. Again and ended up following this error:
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
object 'vI' not found
Calls: ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘tidyposterior’

  • removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/tidyposterior’
    ERROR: dependency ‘tidyposterior’ is not available for package ‘tidymodels’
  • removing ‘/home/bahman/R/x86_64-pc-linux-gnu-library/3.6/tidymodels’

The downloaded source packages are in
‘/tmp/RtmpZt3nxD/downloaded_packages’
Warning messages:
1: In install.packages("tidymodels") :
installation of package ‘rstanarm’ had non-zero exit status
2: In install.packages("tidymodels") :
installation of package ‘tidyposterior’ had non-zero exit status
3: In install.packages("tidymodels") :
installation of package ‘tidymodels’ had non-zero exit status

4

Well, something has changed since this is a different error message.
This error is related to your base R installation, is not very informative but you could try updating your packages with

update.packages(checkBuilt=TRUE)

Then restart your R session and try to install again. If that doesn't work I would suggest completely removing R (including libraries) and reinstalling again.

5

Thanks Andresrcs. I am going to check it out.

6

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