Issue: Installing tidyverse

Roof_Tile · December 21, 2020, 10:54am

Hi, R beginner here. Just installed R and I'm trying to install tidyverse, so I run:

install.packages("tidyverse")

it asks me: "Do you want to install from sources the packages which need compilation?"
I say "y" and then:
Packages which are only available in source form, and may need compilation of C/C++/Fortran: ‘ps’ ‘xfun’ ‘ellipsis’ ‘fansi’ ‘vctrs’ ‘isoband’ ‘fs’*

Do you want to attempt to install these from sources?
I say "y" and this gives me:

ERROR: dependencies ‘broom’, ‘cli’, ‘dbplyr’, ‘forcats’, ‘ggplot2’, ‘hms’, ‘magrittr’, ‘modelr’, ‘pillar’, ‘reprex’, ‘rvest’, ‘stringr’ are not available for package ‘tidyverse’
* removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/tidyverse’
Warning in install.packages :
  installation of package ‘tidyverse’ had non-zero exit status

The downloaded source packages are in
	‘/private/var/folders/87/ks1n2vyn48q4_hx6d07p37j00000gn/T/RtmpUigkZ1/downloaded_packages’

Specifics:
Mac OS version: 10.10.5 (kinda old)
R version: 3.3.3 (For tidyverse, R version 3.2 or higher is required so GOOD)
R Studio Version: 1.1.463 (older version)

andresrcs · December 21, 2020, 11:21am

You are omitting the important parts of the error message please post the complete output. Also, you are using a very old R version, this is going to make package installation in general much harder, I strongly recommend you to update to the latest version (4.0.3).

Roof_Tile · December 21, 2020, 11:36am

I have an older version of R because recent ones are not supported by my old Mac OS 10.10.5.

A full disclosure of the error: (Part 1)

> install.packages("tidyverse")
Loading required package: tidyverse
also installing the dependencies ‘processx’, ‘knitr’, ‘tinytex’, ‘ellipsis’, ‘lifecycle’, ‘tidyselect’, ‘blob’, ‘vctrs’, ‘progress’, ‘callr’, ‘rmarkdown’, ‘selectr’, ‘broom’, ‘cli’, ‘dbplyr’, ‘dplyr’, ‘forcats’, ‘ggplot2’, ‘haven’, ‘hms’, ‘jsonlite’, ‘lubridate’, ‘magrittr’, ‘modelr’, ‘pillar’, ‘purrr’, ‘readr’, ‘readxl’, ‘reprex’, ‘rlang’, ‘rvest’, ‘stringr’, ‘tibble’, ‘tidyr’, ‘xml2’


  There are binary versions available but the source versions are later:
            binary  source needs_compilation
processx   2.0.0.1   3.4.5              TRUE
knitr         1.18    1.30             FALSE
tinytex        0.2    0.28             FALSE
tidyselect   0.2.3   1.1.0              TRUE
blob         1.1.0   1.2.1             FALSE
progress     1.1.2   1.2.2             FALSE
callr        1.0.0   3.5.1             FALSE
rmarkdown      1.8     2.6             FALSE
selectr      0.3-1   0.4-2             FALSE
broom        0.4.3   0.7.3             FALSE
cli          1.0.0   2.2.0             FALSE
dbplyr       1.1.0   2.0.0             FALSE
dplyr        0.7.4   1.0.2              TRUE
forcats      0.2.0   0.5.0             FALSE
ggplot2      2.2.1   3.3.2             FALSE
haven        1.1.0   2.3.1              TRUE
hms          0.4.0   0.5.3             FALSE
jsonlite       1.5   1.7.2              TRUE
lubridate    1.7.1 1.7.9.2              TRUE
magrittr       1.5   2.0.1             FALSE
modelr       0.1.1   0.1.8             FALSE
pillar       1.0.1   1.4.7             FALSE
purrr        0.2.4   0.3.4              TRUE
readr        1.1.1   1.4.0              TRUE
readxl       1.0.0   1.3.1              TRUE
rlang        0.1.6   0.4.9              TRUE
rvest        0.3.2   0.3.6             FALSE
stringr      1.2.0   1.4.0             FALSE
tibble       1.3.4   3.0.4              TRUE
tidyr        0.7.2   1.1.2              TRUE
xml2         1.1.1   1.3.2              TRUE
tidyverse    1.1.1   1.3.0             FALSE

Do you want to install from sources the packages which need compilation?
y/n: y
Packages which are only available in source form, and may need compilation of C/C++/Fortran:
  ‘ellipsis’ ‘vctrs’
Do you want to attempt to install these from sources?
y/n: y
installing the source packages ‘processx’, ‘knitr’, ‘tinytex’, ‘ellipsis’, ‘lifecycle’, ‘tidyselect’, ‘blob’, ‘vctrs’, ‘progress’, ‘callr’, ‘rmarkdown’, ‘selectr’, ‘broom’, ‘cli’, ‘dbplyr’, ‘dplyr’, ‘forcats’, ‘ggplot2’, ‘haven’, ‘hms’, ‘jsonlite’, ‘lubridate’, ‘magrittr’, ‘modelr’, ‘pillar’, ‘purrr’, ‘readr’, ‘readxl’, ‘reprex’, ‘rlang’, ‘rvest’, ‘stringr’, ‘tibble’, ‘tidyr’, ‘xml2’, ‘tidyverse’

trying URL 'https://cran.rstudio.com/src/contrib/processx_3.4.5.tar.gz'
Content type 'application/x-gzip' length 135121 bytes (131 KB)
==================================================
downloaded 131 KB

trying URL 'https://cran.rstudio.com/src/contrib/knitr_1.30.tar.gz'
Content type 'application/x-gzip' length 887652 bytes (866 KB)
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downloaded 866 KB

trying URL 'https://cran.rstudio.com/src/contrib/tinytex_0.28.tar.gz'
Content type 'application/x-gzip' length 27595 bytes (26 KB)
==================================================
downloaded 26 KB

trying URL 'https://cran.rstudio.com/src/contrib/ellipsis_0.3.1.tar.gz'
Content type 'application/x-gzip' length 7582 bytes
==================================================
downloaded 7582 bytes

trying URL 'https://cran.rstudio.com/src/contrib/lifecycle_0.2.0.tar.gz'
Content type 'application/x-gzip' length 164455 bytes (160 KB)
==================================================
downloaded 160 KB

trying URL 'https://cran.rstudio.com/src/contrib/tidyselect_1.1.0.tar.gz'
Content type 'application/x-gzip' length 90842 bytes (88 KB)
==================================================
downloaded 88 KB

trying URL 'https://cran.rstudio.com/src/contrib/blob_1.2.1.tar.gz'
Content type 'application/x-gzip' length 10099 bytes
==================================================
downloaded 10099 bytes

trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.3.6.tar.gz'
Content type 'application/x-gzip' length 778016 bytes (759 KB)
==================================================
downloaded 759 KB

trying URL 'https://cran.rstudio.com/src/contrib/progress_1.2.2.tar.gz'
Content type 'application/x-gzip' length 29506 bytes (28 KB)
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downloaded 28 KB

trying URL 'https://cran.rstudio.com/src/contrib/callr_3.5.1.tar.gz'
Content type 'application/x-gzip' length 77905 bytes (76 KB)
==================================================
downloaded 76 KB

trying URL 'https://cran.rstudio.com/src/contrib/rmarkdown_2.6.tar.gz'
Content type 'application/x-gzip' length 3213194 bytes (3.1 MB)
==================================================
downloaded 3.1 MB

trying URL 'https://cran.rstudio.com/src/contrib/selectr_0.4-2.tar.gz'
Content type 'application/x-gzip' length 41371 bytes (40 KB)
==================================================
downloaded 40 KB

trying URL 'https://cran.rstudio.com/src/contrib/broom_0.7.3.tar.gz'
Content type 'application/x-gzip' length 618499 bytes (604 KB)
==================================================
downloaded 604 KB

trying URL 'https://cran.rstudio.com/src/contrib/cli_2.2.0.tar.gz'
Content type 'application/x-gzip' length 120676 bytes (117 KB)
==================================================
downloaded 117 KB

trying URL 'https://cran.rstudio.com/src/contrib/dbplyr_2.0.0.tar.gz'
Content type 'application/x-gzip' length 534910 bytes (522 KB)
==================================================
downloaded 522 KB

trying URL 'https://cran.rstudio.com/src/contrib/dplyr_1.0.2.tar.gz'
Content type 'application/x-gzip' length 935654 bytes (913 KB)
==================================================
downloaded 913 KB

trying URL 'https://cran.rstudio.com/src/contrib/forcats_0.5.0.tar.gz'
Content type 'application/x-gzip' length 257126 bytes (251 KB)
==================================================
downloaded 251 KB

trying URL 'https://cran.rstudio.com/src/contrib/ggplot2_3.3.2.tar.gz'
Content type 'application/x-gzip' length 3054431 bytes (2.9 MB)
==================================================
downloaded 2.9 MB

trying URL 'https://cran.rstudio.com/src/contrib/haven_2.3.1.tar.gz'
Content type 'application/x-gzip' length 277509 bytes (271 KB)
==================================================
downloaded 271 KB

trying URL 'https://cran.rstudio.com/src/contrib/hms_0.5.3.tar.gz'
Content type 'application/x-gzip' length 134669 bytes (131 KB)
==================================================
downloaded 131 KB

trying URL 'https://cran.rstudio.com/src/contrib/jsonlite_1.7.2.tar.gz'
Content type 'application/x-gzip' length 421716 bytes (411 KB)
==================================================
downloaded 411 KB

trying URL 'https://cran.rstudio.com/src/contrib/lubridate_1.7.9.2.tar.gz'
Content type 'application/x-gzip' length 472640 bytes (461 KB)
==================================================
downloaded 461 KB

trying URL 'https://cran.rstudio.com/src/contrib/magrittr_2.0.1.tar.gz'
Content type 'application/x-gzip' length 265580 bytes (259 KB)
==================================================
downloaded 259 KB

trying URL 'https://cran.rstudio.com/src/contrib/modelr_0.1.8.tar.gz'
Content type 'application/x-gzip' length 121333 bytes (118 KB)
==================================================
downloaded 118 KB

trying URL 'https://cran.rstudio.com/src/contrib/pillar_1.4.7.tar.gz'
Content type 'application/x-gzip' length 113345 bytes (110 KB)
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downloaded 110 KB

trying URL 'https://cran.rstudio.com/src/contrib/purrr_0.3.4.tar.gz'
Content type 'application/x-gzip' length 375062 bytes (366 KB)
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downloaded 366 KB

trying URL 'https://cran.rstudio.com/src/contrib/readr_1.4.0.tar.gz'
Content type 'application/x-gzip' length 488946 bytes (477 KB)
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downloaded 477 KB

trying URL 'https://cran.rstudio.com/src/contrib/readxl_1.3.1.tar.gz'
Content type 'application/x-gzip' length 2056165 bytes (2.0 MB)
==================================================
downloaded 2.0 MB

trying URL 'https://cran.rstudio.com/src/contrib/reprex_0.3.0.tar.gz'
Content type 'application/x-gzip' length 1052597 bytes (1.0 MB)
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downloaded 1.0 MB

trying URL 'https://cran.rstudio.com/src/contrib/rlang_0.4.9.tar.gz'
Content type 'application/x-gzip' length 865299 bytes (845 KB)
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downloaded 845 KB

trying URL 'https://cran.rstudio.com/src/contrib/rvest_0.3.6.tar.gz'
Content type 'application/x-gzip' length 2806156 bytes (2.7 MB)
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downloaded 2.7 MB

trying URL 'https://cran.rstudio.com/src/contrib/stringr_1.4.0.tar.gz'
Content type 'application/x-gzip' length 135777 bytes (132 KB)
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downloaded 132 KB

trying URL 'https://cran.rstudio.com/src/contrib/tibble_3.0.4.tar.gz'
Content type 'application/x-gzip' length 255457 bytes (249 KB)
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downloaded 249 KB

trying URL 'https://cran.rstudio.com/src/contrib/tidyr_1.1.2.tar.gz'
Content type 'application/x-gzip' length 881544 bytes (860 KB)
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trying URL 'https://cran.rstudio.com/src/contrib/xml2_1.3.2.tar.gz'
Content type 'application/x-gzip' length 271876 bytes (265 KB)
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downloaded 265 KB

trying URL 'https://cran.rstudio.com/src/contrib/tidyverse_1.3.0.tar.gz'
Content type 'application/x-gzip' length 712837 bytes (696 KB)
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* installing *source* package ‘processx’ ...
** package ‘processx’ successfully unpacked and MD5 sums checked
** libs
clang -Wall -mtune=core2 -g -O2  -Wall tools/px.c -o tools/px
clang -Wall -mtune=core2 -g -O2  supervisor/supervisor.c supervisor/utils.c \
	      -o supervisor/supervisor
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c base64.c -o base64.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c client.c -o client.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c errors.c -o errors.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o client.so base64.o client.o errors.o   -F/Library/Frameworks/R.framework/.. -framework R
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c init.c -o init.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c poll.c -o poll.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c processx-connection.c -o processx-connection.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c processx-vector.c -o processx-vector.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c create-time.c -o create-time.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unix/childlist.c -o unix/childlist.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unix/connection.c -o unix/connection.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unix/processx.c -o unix/processx.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unix/sigchld.c -o unix/sigchld.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unix/utils.c -o unix/utils.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unix/named_pipe.c -o unix/named_pipe.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c cleancall.c -o cleancall.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing via 'install.libs.R' to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/processx
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (processx)
* installing *source* package ‘tinytex’ ...
** package ‘tinytex’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (tinytex)
* installing *source* package ‘cli’ ...
** package ‘cli’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (cli)
* installing *source* package ‘jsonlite’ ...
** package ‘jsonlite’ successfully unpacked and MD5 sums checked
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c base64.c -o base64.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c collapse_array.c -o collapse_array.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c collapse_object.c -o collapse_object.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c collapse_pretty.c -o collapse_pretty.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c escape_chars.c -o escape_chars.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c integer64_to_na.c -o integer64_to_na.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c is_datelist.c -o is_datelist.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c is_recordlist.c -o is_recordlist.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c is_scalarlist.c -o is_scalarlist.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c modp_numtoa.c -o modp_numtoa.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c null_to_na.c -o null_to_na.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c num_to_char.c -o num_to_char.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c parse.c -o parse.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c prettify.c -o prettify.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c push_parser.c -o push_parser.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c r-base64.c -o r-base64.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c register.c -o register.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c row_collapse.c -o row_collapse.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c transpose_list.c -o transpose_list.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c validate.c -o validate.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl.c -o yajl/yajl.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_buf.c -o yajl/yajl_buf.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_encode.c -o yajl/yajl_encode.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_gen.c -o yajl/yajl_gen.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_lex.c -o yajl/yajl_lex.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_parser.c -o yajl/yajl_parser.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -Iyajl/api -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include     -fPIC  -Wall -mtune=core2 -g -O2  -c yajl/yajl_tree.c -o yajl/yajl_tree.o
ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/jsonlite/libs
** R
** inst
** preparing package for lazy loading
in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (jsonlite)
* installing *source* package ‘lubridate’ ...
** package ‘lubridate’ successfully unpacked and MD5 sums checked
** libs
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_fixed.cc -o cctz/src/time_zone_fixed.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_if.cc -o cctz/src/time_zone_if.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_impl.cc -o cctz/src/time_zone_impl.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_info.cc -o cctz/src/time_zone_info.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_libc.cc -o cctz/src/time_zone_libc.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_lookup.cc -o cctz/src/time_zone_lookup.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/time_zone_posix.cc -o cctz/src/time_zone_posix.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cctz/src/zone_info_source.cc -o cctz/src/zone_info_source.o
ar rcs libcctz.a ./cctz/src/time_zone_fixed.o ./cctz/src/time_zone_if.o ./cctz/src/time_zone_impl.o ./cctz/src/time_zone_info.o ./cctz/src/time_zone_libc.o ./cctz/src/time_zone_lookup.o ./cctz/src/time_zone_posix.o ./cctz/src/zone_info_source.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c update.cpp -o update.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c utils.c -o utils.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c datetime.c -o datetime.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c period.c -o period.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -I./cctz/src/ -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c tparse.c -o tparse.o
clang++ -std=c++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o lubridate.so RcppExports.o update.o utils.o datetime.o period.o tparse.o -L. -lcctz -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/lubridate/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (lubridate)
* installing *source* package ‘magrittr’ ...
** package ‘magrittr’ successfully unpacked and MD5 sums checked
** libs

Roof_Tile · December 21, 2020, 11:38am

Full disclosure of the error: (Part 2)

* installing *source* package ‘purrr’ ...
** package ‘purrr’ successfully unpacked and MD5 sums checked
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c backports.c -o backports.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c coerce.c -o coerce.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c conditions.c -o conditions.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c flatten.c -o flatten.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c init.c -o init.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c map.c -o map.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c pluck.c -o pluck.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c transpose.c -o transpose.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c utils.c -o utils.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/purrr/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (purrr)
* installing *source* package ‘stringr’ ...
** package ‘stringr’ successfully unpacked and MD5 sums checked

** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (stringr)
* installing *source* package ‘knitr’ ...
** package ‘knitr’ successfully unpacked and MD5 sums checked
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (knitr)
* installing *source* package ‘vctrs’ ...
** package ‘vctrs’ successfully unpacked and MD5 sums checked
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c altrep-rle.c -o altrep-rle.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c arg-counter.c -o arg-counter.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c arg.c -o arg.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c bind.c -o bind.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c c-unchop.c -o c-unchop.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c c.c -o c.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c callables.c -o callables.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c cast-bare.c -o cast-bare.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c cast-dispatch.c -o cast-dispatch.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c cast.c -o cast.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c compare.c -o compare.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c complete.c -o complete.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c conditions.c -o conditions.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c dictionary.c -o dictionary.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c dim.c -o dim.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c equal.c -o equal.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c fields.c -o fields.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c fill.c -o fill.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c group.c -o group.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c growable.c -o growable.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c hash.c -o hash.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c init.c -o init.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c names.c -o names.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c order-groups.c -o order-groups.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c order-radix.c -o order-radix.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c order-sortedness.c -o order-sortedness.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c order-truelength.c -o order-truelength.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c poly-op.c -o poly-op.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c proxy-restore.c -o proxy-restore.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c proxy.c -o proxy.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c ptype2-dispatch.c -o ptype2-dispatch.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c rep.c -o rep.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c runs.c -o runs.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c shape.c -o shape.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c size-common.c -o size-common.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c size.c -o size.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c slice-array.c -o slice-array.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c slice-assign-array.c -o slice-assign-array.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c slice-assign.c -o slice-assign.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c slice-chop.c -o slice-chop.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c slice.c -o slice.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c split.c -o split.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c subscript-loc.c -o subscript-loc.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c subscript.c -o subscript.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c translate.c -o translate.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type-data-frame.c -o type-data-frame.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type-date-time.c -o type-date-time.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type-factor.c -o type-factor.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type-info.c -o type-info.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type-tibble.c -o type-tibble.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type.c -o type.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c type2.c -o type2.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c typeof2-s3.c -o typeof2-s3.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c typeof2.c -o typeof2.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c unspecified.c -o unspecified.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c utils-dispatch.c -o utils-dispatch.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c utils-rlang.c -o utils-rlang.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c utils.c -o utils.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c version.c -o version.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/vctrs/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (vctrs)
* installing *source* package ‘selectr’ ...
** package ‘selectr’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (selectr)
* installing *source* package ‘tidyselect’ ...
** package ‘tidyselect’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tidyselect)
* installing *source* package ‘blob’ ...
** package ‘blob’ successfully unpacked and MD5 sums checked
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (blob)
* installing *source* package ‘rmarkdown’ ...
** package ‘rmarkdown’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rmarkdown)
* installing *source* package ‘hms’ ...
** package ‘hms’ successfully unpacked and MD5 sums checked
** R
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (hms)
* installing *source* package ‘pillar’ ...
** package ‘pillar’ successfully unpacked and MD5 sums checked
** R
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (pillar)
* installing *source* package ‘rvest’ ...
** package ‘rvest’ successfully unpacked and MD5 sums checked
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rvest)
* installing *source* package ‘progress’ ...
** package ‘progress’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (progress)
* installing *source* package ‘reprex’ ...
** package ‘reprex’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (reprex)
* installing *source* package ‘tibble’ ...
** package ‘tibble’ successfully unpacked and MD5 sums checked
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c attributes.c -o attributes.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c coerce.c -o coerce.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c init.c -o init.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c matrixToDataFrame.c -o matrixToDataFrame.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/tibble/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tibble)
* installing *source* package ‘dplyr’ ...
** package ‘dplyr’ successfully unpacked and MD5 sums checked
** libs
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c filter.cpp -o filter.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c funs.cpp -o funs.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c group_by.cpp -o group_by.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c group_data.cpp -o group_data.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c imports.cpp -o imports.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c init.cpp -o init.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c mutate.cpp -o mutate.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c slice.cpp -o slice.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c summarise.cpp -o summarise.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o dplyr.so filter.o funs.o group_by.o group_data.o imports.o init.o mutate.o slice.o summarise.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/dplyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (dplyr)
* installing *source* package ‘forcats’ ...
** package ‘forcats’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (forcats)
* installing *source* package ‘ggplot2’ ...
** package ‘ggplot2’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : 
  there is no package called ‘plyr’
ERROR: lazy loading failed for package ‘ggplot2’
* removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/ggplot2’
Warning in install.packages :
  installation of package ‘ggplot2’ had non-zero exit status
* installing *source* package ‘readr’ ...
** package ‘readr’ successfully unpacked and MD5 sums checked
** libs
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c Collector.cpp -o Collector.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c CollectorGuess.cpp -o CollectorGuess.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c Iconv.cpp -o Iconv.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c LocaleInfo.cpp -o LocaleInfo.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c Reader.cpp -o Reader.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c Source.cpp -o Source.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c Tokenizer.cpp -o Tokenizer.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c TokenizerDelim.cpp -o TokenizerDelim.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c TokenizerFwf.cpp -o TokenizerFwf.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c TokenizerWs.cpp -o TokenizerWs.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c connection.cpp -o connection.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cpp11.cpp -o cpp11.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c datetime.cpp -o datetime.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c grisu3.c -o grisu3.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c init.c -o init.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c localtime.c -o localtime.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c parse.cpp -o parse.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/i

Roof_Tile · December 21, 2020, 11:39am

I omitted a part, and this is part 3



*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (dbplyr)
* installing *source* package ‘haven’ ...
** package ‘haven’ successfully unpacked and MD5 sums checked
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c tagged_na.c -o tagged_na.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/CKHashTable.c -o readstat/CKHashTable.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_bits.c -o readstat/readstat_bits.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_convert.c -o readstat/readstat_convert.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_error.c -o readstat/readstat_error.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_io_unistd.c -o readstat/readstat_io_unistd.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_malloc.c -o readstat/readstat_malloc.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_metadata.c -o readstat/readstat_metadata.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_parser.c -o readstat/readstat_parser.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_value.c -o readstat/readstat_value.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_variable.c -o readstat/readstat_variable.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/readstat_writer.c -o readstat/readstat_writer.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/ieee.c -o readstat/sas/ieee.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_sas.c -o readstat/sas/readstat_sas.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_sas7bcat_read.c -o readstat/sas/readstat_sas7bcat_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_sas7bcat_write.c -o readstat/sas/readstat_sas7bcat_write.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_sas7bdat_read.c -o readstat/sas/readstat_sas7bdat_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_sas7bdat_write.c -o readstat/sas/readstat_sas7bdat_write.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_sas_rle.c -o readstat/sas/readstat_sas_rle.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_xport.c -o readstat/sas/readstat_xport.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_xport_read.c -o readstat/sas/readstat_xport_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/sas/readstat_xport_write.c -o readstat/sas/readstat_xport_write.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_por.c -o readstat/spss/readstat_por.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_por_parse.c -o readstat/spss/readstat_por_parse.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_por_read.c -o readstat/spss/readstat_por_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_por_write.c -o readstat/spss/readstat_por_write.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_sav.c -o readstat/spss/readstat_sav.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_sav_compress.c -o readstat/spss/readstat_sav_compress.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_sav_parse.c -o readstat/spss/readstat_sav_parse.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_sav_parse_timestamp.c -o readstat/spss/readstat_sav_parse_timestamp.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_sav_read.c -o readstat/spss/readstat_sav_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_sav_write.c -o readstat/spss/readstat_sav_write.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_spss.c -o readstat/spss/readstat_spss.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_spss_parse.c -o readstat/spss/readstat_spss_parse.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_zsav_compress.c -o readstat/spss/readstat_zsav_compress.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_zsav_read.c -o readstat/spss/readstat_zsav_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/spss/readstat_zsav_write.c -o readstat/spss/readstat_zsav_write.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/stata/readstat_dta.c -o readstat/stata/readstat_dta.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/stata/readstat_dta_parse_timestamp.c -o readstat/stata/readstat_dta_parse_timestamp.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/stata/readstat_dta_read.c -o readstat/stata/readstat_dta_read.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c readstat/stata/readstat_dta_write.c -o readstat/stata/readstat_dta_write.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c DfReader.cpp -o DfReader.o
DfReader.cpp:118:11: warning: private field 'ext_' is not used [-Wunused-private-field]
  FileExt ext_;
          ^
1 warning generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c DfWriter.cpp -o DfWriter.o
DfWriter.cpp:123:12: warning: enumeration values 'HAVEN_POR' and 'HAVEN_SAS7BCAT' not handled in switch [-Wswitch]
    switch(ext_) {
           ^
1 warning generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"  -Ireadstat -DHAVE_ZLIB -fPIC  -Wall -mtune=core2 -g -O2  -c haven_types.cpp -o haven_types.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o haven.so tagged_na.o readstat/CKHashTable.o readstat/readstat_bits.o readstat/readstat_convert.o readstat/readstat_error.o readstat/readstat_io_unistd.o readstat/readstat_malloc.o readstat/readstat_metadata.o readstat/readstat_parser.o readstat/readstat_value.o readstat/readstat_variable.o readstat/readstat_writer.o readstat/sas/ieee.o readstat/sas/readstat_sas.o readstat/sas/readstat_sas7bcat_read.o readstat/sas/readstat_sas7bcat_write.o readstat/sas/readstat_sas7bdat_read.o readstat/sas/readstat_sas7bdat_write.o readstat/sas/readstat_sas_rle.o readstat/sas/readstat_xport.o readstat/sas/readstat_xport_read.o readstat/sas/readstat_xport_write.o readstat/spss/readstat_por.o readstat/spss/readstat_por_parse.o readstat/spss/readstat_por_read.o readstat/spss/readstat_por_write.o readstat/spss/readstat_sav.o readstat/spss/readstat_sav_compress.o readstat/spss/readstat_sav_parse.o readstat/spss/readstat_sav_parse_timestamp.o readstat/spss/readstat_sav_read.o readstat/spss/readstat_sav_write.o readstat/spss/readstat_spss.o readstat/spss/readstat_spss_parse.o readstat/spss/readstat_zsav_compress.o readstat/spss/readstat_zsav_read.o readstat/spss/readstat_zsav_write.o readstat/stata/readstat_dta.o readstat/stata/readstat_dta_parse_timestamp.o readstat/stata/readstat_dta_read.o readstat/stata/readstat_dta_write.o DfReader.o DfWriter.o RcppExports.o haven_types.o -lz -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/haven/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (haven)
* installing *source* package ‘tidyr’ ...
** package ‘tidyr’ successfully unpacked and MD5 sums checked
** libs
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c cpp11.cpp -o cpp11.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c fill.cpp -o fill.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c melt.cpp -o melt.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/cpp11/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o
clang++ -std=c++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/tidyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tidyr)
* installing *source* package ‘broom’ ...
** package ‘broom’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (broom)
* installing *source* package ‘modelr’ ...
** package ‘modelr’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (modelr)
ERROR: dependency ‘ggplot2’ is not available for package ‘tidyverse’
* removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/tidyverse’
Warning in install.packages :
  installation of package ‘tidyverse’ had non-zero exit status

The downloaded source packages are in
	‘/private/var/folders/87/ks1n2vyn48q4_hx6d07p37j00000gn/T/RtmpUigkZ1/downloaded_packages’
Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘tidyverse’

andresrcs · December 21, 2020, 11:51am

I can't be sure if this is your only problem but you are missing the plyr package, try installing it first, Do you get any error message?

install.packages("plyr")

system · January 11, 2021, 11:51am

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