Package for testing association

Was wondering what package/s I can use to test association between microbiome and diet data?

I have a phyloseq object that contains otu_table, tax_table, sam_data, and phy_tree. Diet data contains energy, protein, carb, and fiber, and also have food groups for each sample.

I also want to be able to adjust for sex, age, birthplace, etc.

This topic was automatically closed 21 days after the last reply. New replies are no longer allowed.

If you have a query related to it or one of the replies, start a new topic and refer back with a link.