...............................................
...............................................
* installing *source* package 'lifecycle' ...
** package 'lifecycle' successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'lifecycle'
finding HTML links ... done
badge html
deprecate_soft html
deprecated html
expect_deprecated html
last_lifecycle_warnings html
lifecycle-package html
lint_lifecycle html
signal_experimental html
signal_stage html
verbosity html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* DONE (lifecycle)
The downloaded source packages are in
‘C:\Users\BRIJO\AppData\Local\Temp\RtmpY1ccJg\downloaded_packages’
>
> library(rattle)
Loading required package: tibble
Loading required package: bitops
Rattle: A free graphical interface for data science with R.
Version 5.5.1 Copyright (c) 2006-2021 Togaware Pty Ltd.
Type 'rattle()' to shake, rattle, and roll your data.
> rattle()
Error in rattle() :
The RGtk2 package is not available but is required.
Please install the package using, for example:
install.packages("RGtk2")
> install.packages("RGtK2")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
Warning in install.packages :
package ‘RGtK2’ is not available for this version of R
A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages
> install.packages("ggbiplot")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
Warning in install.packages :
package ‘ggbiplot’ is not available for this version of R
A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages
> install.packages("devtools")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
also installing the dependencies ‘Rcpp’, ‘askpass’, ‘credentials’, ‘openssl’, ‘sys’, ‘zip’, ‘gitcreds’, ‘ini’, ‘fastmap’, ‘httpuv’, ‘mime’, ‘xtable’, ‘fontawesome’, ‘sourcetools’, ‘later’, ‘promises’, ‘base64enc’, ‘sass’, ‘jquerylib’, ‘systemfonts’, ‘textshaping’, ‘tinytex’, ‘xfun’, ‘highr’, ‘diffobj’, ‘rematch2’, ‘clipr’, ‘crayon’, ‘curl’, ‘gert’, ‘gh’, ‘jsonlite’, ‘rappdirs’, ‘rprojroot’, ‘rstudioapi’, ‘whisker’, ‘yaml’, ‘cachem’, ‘shiny’, ‘htmltools’, ‘callr’, ‘prettyunits’, ‘bslib’, ‘downlit’, ‘httr’, ‘ragg’, ‘rmarkdown’, ‘xml2’, ‘htmlwidgets’, ‘xopen’, ‘brew’, ‘commonmark’, ‘knitr’, ‘brio’, ‘evaluate’, ‘praise’, ‘processx’, ‘ps’, ‘waldo’, ‘usethis’, ‘desc’, ‘fs’, ‘memoise’, ‘miniUI’, ‘pkgbuild’, ‘pkgdown’, ‘pkgload’, ‘profvis’, ‘rcmdcheck’, ‘remotes’, ‘roxygen2’, ‘rversions’, ‘sessioninfo’, ‘testthat’, ‘urlchecker’
There is a binary version available but the source version is later:
binary source needs_compilation
httpuv 1.6.5 1.6.6 TRUE
Binaries will be installed
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/Rcpp_1.0.9.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/askpass_1.1.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/credentials_1.3.2.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/openssl_2.0.2.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/sys_3.4.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/zip_2.2.1.zip'
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downloaded 1.1 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/gitcreds_0.1.2.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/ini_0.3.1.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/fastmap_1.1.0.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/httpuv_1.6.5.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/mime_0.12.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/xtable_1.8-4.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/fontawesome_0.3.0.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/promises_1.2.0.1.zip'
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trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/devtools_2.4.4.zip'
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package ‘Rcpp’ successfully unpacked and MD5 sums checked
package ‘askpass’ successfully unpacked and MD5 sums checked
package ‘credentials’ successfully unpacked and MD5 sums checked
package ‘openssl’ successfully unpacked and MD5 sums checked
package ‘sys’ successfully unpacked and MD5 sums checked
package ‘zip’ successfully unpacked and MD5 sums checked
package ‘gitcreds’ successfully unpacked and MD5 sums checked
package ‘ini’ successfully unpacked and MD5 sums checked
package ‘fastmap’ successfully unpacked and MD5 sums checked
package ‘httpuv’ successfully unpacked and MD5 sums checked
package ‘mime’ successfully unpacked and MD5 sums checked
package ‘xtable’ successfully unpacked and MD5 sums checked
package ‘fontawesome’ successfully unpacked and MD5 sums checked
package ‘sourcetools’ successfully unpacked and MD5 sums checked
package ‘later’ successfully unpacked and MD5 sums checked
package ‘promises’ successfully unpacked and MD5 sums checked
package ‘base64enc’ successfully unpacked and MD5 sums checked
package ‘sass’ successfully unpacked and MD5 sums checked
package ‘jquerylib’ successfully unpacked and MD5 sums checked
package ‘systemfonts’ successfully unpacked and MD5 sums checked
package ‘textshaping’ successfully unpacked and MD5 sums checked
package ‘tinytex’ successfully unpacked and MD5 sums checked
package ‘xfun’ successfully unpacked and MD5 sums checked
package ‘highr’ successfully unpacked and MD5 sums checked
package ‘diffobj’ successfully unpacked and MD5 sums checked
package ‘rematch2’ successfully unpacked and MD5 sums checked
package ‘clipr’ successfully unpacked and MD5 sums checked
package ‘crayon’ successfully unpacked and MD5 sums checked
package ‘curl’ successfully unpacked and MD5 sums checked
package ‘gert’ successfully unpacked and MD5 sums checked
package ‘gh’ successfully unpacked and MD5 sums checked
package ‘jsonlite’ successfully unpacked and MD5 sums checked
package ‘rappdirs’ successfully unpacked and MD5 sums checked
package ‘rprojroot’ successfully unpacked and MD5 sums checked
package ‘rstudioapi’ successfully unpacked and MD5 sums checked
package ‘whisker’ successfully unpacked and MD5 sums checked
package ‘yaml’ successfully unpacked and MD5 sums checked
package ‘cachem’ successfully unpacked and MD5 sums checked
package ‘shiny’ successfully unpacked and MD5 sums checked
package ‘htmltools’ successfully unpacked and MD5 sums checked
package ‘callr’ successfully unpacked and MD5 sums checked
package ‘prettyunits’ successfully unpacked and MD5 sums checked
package ‘bslib’ successfully unpacked and MD5 sums checked
package ‘downlit’ successfully unpacked and MD5 sums checked
package ‘httr’ successfully unpacked and MD5 sums checked
package ‘ragg’ successfully unpacked and MD5 sums checked
package ‘rmarkdown’ successfully unpacked and MD5 sums checked
package ‘xml2’ successfully unpacked and MD5 sums checked
package ‘htmlwidgets’ successfully unpacked and MD5 sums checked
package ‘xopen’ successfully unpacked and MD5 sums checked
package ‘brew’ successfully unpacked and MD5 sums checked
package ‘commonmark’ successfully unpacked and MD5 sums checked
package ‘knitr’ successfully unpacked and MD5 sums checked
package ‘brio’ successfully unpacked and MD5 sums checked
package ‘evaluate’ successfully unpacked and MD5 sums checked
package ‘praise’ successfully unpacked and MD5 sums checked
package ‘processx’ successfully unpacked and MD5 sums checked
package ‘ps’ successfully unpacked and MD5 sums checked
package ‘waldo’ successfully unpacked and MD5 sums checked
package ‘usethis’ successfully unpacked and MD5 sums checked
package ‘desc’ successfully unpacked and MD5 sums checked
package ‘fs’ successfully unpacked and MD5 sums checked
package ‘memoise’ successfully unpacked and MD5 sums checked
package ‘miniUI’ successfully unpacked and MD5 sums checked
package ‘pkgbuild’ successfully unpacked and MD5 sums checked
package ‘pkgdown’ successfully unpacked and MD5 sums checked
package ‘pkgload’ successfully unpacked and MD5 sums checked
package ‘profvis’ successfully unpacked and MD5 sums checked
package ‘rcmdcheck’ successfully unpacked and MD5 sums checked
package ‘remotes’ successfully unpacked and MD5 sums checked
package ‘roxygen2’ successfully unpacked and MD5 sums checked
package ‘rversions’ successfully unpacked and MD5 sums checked
package ‘sessioninfo’ successfully unpacked and MD5 sums checked
package ‘testthat’ successfully unpacked and MD5 sums checked
package ‘urlchecker’ successfully unpacked and MD5 sums checked
package ‘devtools’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\BRIJO\AppData\Local\Temp\RtmpY1ccJg\downloaded_packages
> library(devtools)
Loading required package: usethis
> install_github("vqv/ggbiplot")
WARNING: Rtools is required to build R packages, but is not currently installed.
Please download and install Rtools 4.0 from https://cran.r-project.org/bin/windows/Rtools/.
Downloading GitHub repo vqv/ggbiplot@HEAD
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
1: All
2: CRAN packages only
3: None
4: cli (3.3.0 -> 3.4.0) [CRAN]
Enter one or more numbers, or an empty line to skip updates: 1
cli (3.3.0 -> 3.4.0) [CRAN]
plyr (NA -> 1.8.7) [CRAN]
Installing 2 packages: cli, plyr
Installing packages into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
There is a binary version available but the source version is later:
binary source needs_compilation
cli 3.3.0 3.4.0 TRUE
Binaries will be installed
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/cli_3.3.0.zip'
Content type 'application/zip' length 1262415 bytes (1.2 MB)
downloaded 1.2 MB
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/plyr_1.8.7.zip'
Content type 'application/zip' length 1500635 bytes (1.4 MB)
downloaded 1.4 MB
package ‘cli’ successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package ‘cli’
Warning: restored ‘cli’
package ‘plyr’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\BRIJO\AppData\Local\Temp\RtmpY1ccJg\downloaded_packages
WARNING: Rtools is required to build R packages, but is not currently installed.
Please download and install Rtools 4.0 from https://cran.r-project.org/bin/windows/Rtools/.
v checking for file 'C:\Users\BRIJO\AppData\Local\Temp\RtmpY1ccJg\remotes43f020cf5541\vqv-ggbiplot-7325e88/DESCRIPTION' ...
- preparing 'ggbiplot':
v checking DESCRIPTION meta-information ...
- checking for LF line-endings in source and make files and shell scripts
- checking for empty or unneeded directories
- looking to see if a 'data/datalist' file should be added
- building 'ggbiplot_0.55.tar.gz'
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
* installing *source* package 'ggbiplot' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ggbiplot'
finding HTML links ... done
ggbiplot html
ggscreeplot html
wine html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* DONE (ggbiplot)
Warning messages:
1: In untar2(tarfile, files, list, exdir) :
skipping pax global extended headers
2: In untar2(tarfile, files, list, exdir) :
skipping pax global extended headers
3: In file.copy(savedcopy, lib, recursive = TRUE) :
problem copying C:\Users\BRIJO\Documents\R\win-library\4.1\00LOCK\cli\libs\x64\cli.dll to C:\Users\BRIJO\Documents\R\win-library\4.1\cli\libs\x64\cli.dll: Permission denied
> install_github("vqv/ggbiplot",force = TRUE)
WARNING: Rtools is required to build R packages, but is not currently installed.
Please download and install Rtools 4.0 from https://cran.r-project.org/bin/windows/Rtools/.
Downloading GitHub repo vqv/ggbiplot@HEAD
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
1: All
2: CRAN packages only
3: None
4: cli (3.3.0 -> 3.4.0) [CRAN]
Enter one or more numbers, or an empty line to skip updates: 1
cli (3.3.0 -> 3.4.0) [CRAN]
Installing 1 packages: cli
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
There is a binary version available but the source version is later:
binary source needs_compilation
cli 3.3.0 3.4.0 TRUE
Binaries will be installed
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.1/cli_3.3.0.zip'
Content type 'application/zip' length 1262415 bytes (1.2 MB)
downloaded 1.2 MB
package ‘cli’ successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package ‘cli’
Warning: restored ‘cli’
The downloaded binary packages are in
C:\Users\BRIJO\AppData\Local\Temp\RtmpY1ccJg\downloaded_packages
WARNING: Rtools is required to build R packages, but is not currently installed.
Please download and install Rtools 4.0 from https://cran.r-project.org/bin/windows/Rtools/.
v checking for file 'C:\Users\BRIJO\AppData\Local\Temp\RtmpY1ccJg\remotes43f01656037\vqv-ggbiplot-7325e88/DESCRIPTION' ...
- preparing 'ggbiplot':
v checking DESCRIPTION meta-information ...
- checking for LF line-endings in source and make files and shell scripts
- checking for empty or unneeded directories
- looking to see if a 'data/datalist' file should be added
- building 'ggbiplot_0.55.tar.gz'
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
* installing *source* package 'ggbiplot' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ggbiplot'
finding HTML links ... done
ggbiplot html
ggscreeplot html
wine html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* DONE (ggbiplot)
Warning messages:
1: In untar2(tarfile, files, list, exdir) :
skipping pax global extended headers
2: In untar2(tarfile, files, list, exdir) :
skipping pax global extended headers
3: In file.copy(savedcopy, lib, recursive = TRUE) :
problem copying C:\Users\BRIJO\Documents\R\win-library\4.1\00LOCK\cli\libs\x64\cli.dll to C:\Users\BRIJO\Documents\R\win-library\4.1\cli\libs\x64\cli.dll: Permission denied
> install.packages("RGtK2")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
Warning in install.packages :
package ‘RGtK2’ is not available for this version of R
A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages
> library(rattle)
> rattle()
Error in rattle() :
The RGtk2 package is not available but is required.
Please install the package using, for example:
install.packages("RGtk2")
> install.packages("RGtk2")
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
Warning in install.packages :
package ‘RGtk2’ is not available for this version of R
A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages
>
> install.packages("https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip(https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip)", repos=NULL)
WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:
https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/BRIJO/Documents/R/win-library/4.1’
(as ‘lib’ is unspecified)
trying URL 'https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip(https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip)'
Warning in install.packages :
cannot open URL 'https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip(https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip)': HTTP status was '404 Not Found'
Error in download.file(p, destfile, method, mode = "wb", ...) :
cannot open URL 'https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip(https://cran.r-project.org/bin/windows/contrib/3.3/RGtk2_2.20.31.zip)'
Error in install.packages : type == "both" cannot be used with 'repos = NULL'
> ./configure
Error: object '.' not found
> make
Error: object 'make' not found
> make check
Error: unexpected symbol in "make check"
> make install
Error: unexpected symbol in "make install"