Anti_rare <- rarefy_even_depth(Antibiotics, 10000, rngseed = TRUE)
set.seed(TRUE) was used to initialize repeatable random subsampling.
Please record this for your records so others can reproduce.
Try set.seed(TRUE); .Random.seed for the full vector
...
Error in access(object, "otu_table", errorIfNULL) :
otu_table slot is empty.
This is the code used for it, I am using phyloseq for this