Hey! I'm working on a project with the National Health and Nutrition Examination Survey. I'm trying to get a weighted prevalence for difference STIs by both race and gender, with a confidence interval as well.
svyciprop was used specifically because it does better than confint at extremes.
But that function stopped working for me at some point today. I have absolutely no idea why and even my older versions of the file won't produce a CI anymore.
I'm at my wits end and could really use some help!
library(RNHANES)
library(survey)
#> Loading required package: grid
#> Loading required package: Matrix
#> Loading required package: survival
#>
#> Attaching package: 'survey'
#> The following object is masked from 'package:graphics':
#>
#> dotchart
library(dplyr)
#>
#> Attaching package: 'dplyr'
#> The following objects are masked from 'package:stats':
#>
#> filter, lag
#> The following objects are masked from 'package:base':
#>
#> intersect, setdiff, setequal, union
library(tidyverse)
#> Warning: package 'tidyverse' was built under R version 3.6.3
#> Warning: package 'readr' was built under R version 3.6.3
nhanes1999<- nhanes_load_data(c("LAB03","DEMO"), c("1999-2000", "1999-2000"), cache = "./nhanes_data")
#> Cycle 1999-2000 doesn't always follow the normal naming conventions, so skipping the file suffix check.
#> Cycle 1999-2000 doesn't always follow the normal naming conventions, so skipping the file suffix check.
#> Cycle 1999-2000 doesn't always follow the normal naming conventions, so skipping the file suffix check.
#> Downloading LAB03.XPT to C:\Users\Anjana\AppData\Local\Temp\RtmpKw1ldp/LAB03.XPT
#> Cycle 1999-2000 doesn't always follow the normal naming conventions, so skipping the file suffix check.
#> Cycle 1999-2000 doesn't always follow the normal naming conventions, so skipping the file suffix check.
#> Cycle 1999-2000 doesn't always follow the normal naming conventions, so skipping the file suffix check.
#> Downloading DEMO.XPT to C:\Users\Anjana\AppData\Local\Temp\RtmpKw1ldp/DEMO.XPT
Created on 2020-03-12 by the reprex package (v0.3.0)