Crash Information: Rstudion aborts session when running mcmc_trace() from the bayesplot package.
Description of crash -
Steps to reproduce -
System Information:
- RStudio Edition: (Desktop or Server) Desktop
- RStudio Version: 1.2.5033, but also the newest version. I went back to the older one to see if the session would not abort when running this function. It didn't matter; the session aborted at the same place with both versions of RStudio. The function did not cause the session to abort previously when running the older version; that only began to happen after I updated to the newest version.
I can't see how to add the code nor attach the crash report to this message.
R version 4.0.3 (2020-10-10)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Mojave 10.14.6
Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods base
other attached packages:
[1] dotwhisker_0.5.0 broom.mixed_0.2.6 corrplot_0.84
[4] gsubfn_0.7 proto_1.0.0 ggpubr_0.4.0
[7] scales_1.1.1 knitr_1.31 forcats_0.5.1
[10] stringr_1.4.0 purrr_0.3.4 readr_1.4.0
[13] tibble_3.0.6 tidyverse_1.3.0 dplyr_1.0.4
[16] tidyr_1.1.2 loo_2.4.1 bayesplot_1.8.0
[19] brms_2.14.4 rstanarm_2.21.1 Rcpp_1.0.6
[22] rstan_2.21.2 StanHeaders_2.21.0-7 foreign_0.8-80
[25] Hmisc_4.4-2 ggplot2_3.3.3 Formula_1.2-4
[28] survival_3.2-7 lattice_0.20-41
loaded via a namespace (and not attached):
[1] readxl_1.3.1 backports_1.2.1 plyr_1.8.6
[4] igraph_1.2.6 TMB_1.7.19 splines_4.0.3
[7] crosstalk_1.1.1 rstantools_2.1.1 inline_0.3.17
[10] digest_0.6.27 htmltools_0.5.1.1 rsconnect_0.8.16
[13] magrittr_2.0.1 checkmate_2.0.0 cluster_2.1.0
[16] openxlsx_4.2.3 modelr_0.1.8 RcppParallel_5.0.2
[19] matrixStats_0.58.0 xts_0.12.1 prettyunits_1.1.1
[22] jpeg_0.1-8.1 colorspace_2.0-0 rvest_0.3.6
[25] haven_2.3.1 xfun_0.21 tcltk_4.0.3
[28] callr_3.5.1 crayon_1.4.1 jsonlite_1.7.2
[31] lme4_1.1-26 zoo_1.8-8 glue_1.4.2
[34] gtable_0.3.0 V8_3.4.0 car_3.0-10
[37] pkgbuild_1.2.0 abind_1.4-5 mvtnorm_1.1-1
[40] DBI_1.1.1 rstatix_0.6.0 miniUI_0.1.1.1
[43] xtable_1.8-4 htmlTable_2.1.0 ggstance_0.3.5
[46] stats4_4.0.3 DT_0.17 htmlwidgets_1.5.3
[49] httr_1.4.2 threejs_0.3.3 RColorBrewer_1.1-2
[52] ellipsis_0.3.1 farver_2.0.3 pkgconfig_2.0.3
[55] nnet_7.3-14 dbplyr_2.1.0 tidyselect_1.1.0
[58] rlang_0.4.10 reshape2_1.4.4 later_1.1.0.1
[61] munsell_0.5.0 cellranger_1.1.0 tools_4.0.3
[64] cli_2.3.0 generics_0.1.0 broom_0.7.4
[67] ggridges_0.5.3 evaluate_0.14 fastmap_1.1.0
[70] processx_3.4.5 fs_1.5.0 zip_2.1.1
[73] nlme_3.1-149 mime_0.9 projpred_2.0.2
[76] xml2_1.3.2 compiler_4.0.3 shinythemes_1.2.0
[79] rstudioapi_0.13 curl_4.3 gamm4_0.2-6
[82] png_0.1-7 ggsignif_0.6.0 reprex_1.0.0
[85] statmod_1.4.35 stringi_1.5.3 ps_1.5.0
[88] Brobdingnag_1.2-6 Matrix_1.2-18 nloptr_1.2.2.2
[91] markdown_1.1 shinyjs_2.0.0 vctrs_0.3.6
[94] pillar_1.4.7 lifecycle_0.2.0 bridgesampling_1.0-0
[97] data.table_1.13.6 httpuv_1.5.5 R6_2.5.0
[100] latticeExtra_0.6-29 promises_1.2.0.1 rio_0.5.16
[103] gridExtra_2.3 codetools_0.2-16 boot_1.3-25
[106] colourpicker_1.1.0 MASS_7.3-53 gtools_3.8.2
[109] assertthat_0.2.1 withr_2.4.1 shinystan_2.5.0
[112] mgcv_1.8-33 parallel_4.0.3 hms_1.0.0
[115] rpart_4.1-15 coda_0.19-4 minqa_1.2.4
[118] carData_3.0-4 shiny_1.6.0 lubridate_1.7.9.2
[121] base64enc_0.1-3 dygraphs_1.1.1.6
Crash Report:
Also:
- RStudio diagnostics report:
- RStudio application log files: