I would like to analyze the data of multiple immunostaining images using the R package "phenoptr Reports "and "phenoptr".
I installed them according to the site below.
Several fanction were added to Addins.
However, when I ran "Consolidate and summarize" in Addine, I got the following error.
> phenoptrReports:::addin_20_consolidate() 要求されたパッケージ shiny をロード中です Warning: パッケージ ‘shiny’ はバージョン 4.1.1 の R の下で造られました Listening on http://127.0.0.1:6320 Reading "Merge_cell_seg_data". Data is already in microns, no conversion performed Warning: Error in split_phenotype_column: No positive phenotypes found. 3: shiny::runApp 2: shiny::runGadget 1: phenoptrReports:::addin_20_consolidate
I'm new to R and don't know the solution.
Could you please tell me what to do?