I have done sanger sequencing for bacteria and fungi. Species identification was done using NCBI-Blast. Now I have abundant data of bacteria from five 5 different sources. Will I be able to calculate source-sink predictions using source tracker. Few examples are available for OTU table but mine is Blast results.
Can anyone help me
My data table will look like the below one
| Species |
Acinetobacter calcoaceticus |
Acinetobacter junii |
Acinetobacter pittii |
Acinetobacter rhizosphaerae |
Advenella kashmirensis |
Aeribacillus pallidus |
Alcaligenes monasteriensis |
Arthrobacter nicotianae |
Bacillus anthracis |
Bacillus arbutinivorans |
Bacillus aryabhatta |
Bacillus cibi |
Bacillus drentensis |
Bacillus simplex |
Bacillus krulwichiae |
| Indoor air |
191 |
77 |
200 |
75 |
69 |
52 |
49 |
64 |
26 |
81 |
304 |
42 |
105 |
224 |
8 |
| Outdoor air |
26 |
106 |
87 |
29 |
13 |
128 |
4 |
150 |
17 |
39 |
127 |
45 |
41 |
63 |
59 |
| Soil |
18 |
81 |
0 |
58 |
0 |
0 |
0 |
58 |
12 |
6 |
6 |
11 |
3 |
22 |
41 |
| Tap water |
0 |
11 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| Surface |
0 |
88 |
3 |
13 |
0 |
0 |
27 |
0 |
9 |
0 |
25 |
0 |
12 |
18 |
13 |
| well water |
106 |
100 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |