Just upgraded to 4.1 from 4.0.5 on Linux (Ubuntu 20.04), now I'm missing my packages because they're in a 4.0 directory. Can I just rename the package directory and have it work?
No. For major upgrades you need to reinstall the packages.
Ok. Can I delete the old package directory?
If you no longer have the previous version of R installed, then yes.
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