Hey guys, I'm trying to learn how to create UPGMA dendrogram with bootstrap values.
Below is my script. Is there a way to modify this with bootstrapping steps?
upg_nutrients <- amtest_nutrients %>% select(Ammonium, Nitrate, Phosphate)
upg_nutrients2 <- log(amtest_nutrients + 1)
#compute bray curtis distance
pc_upg = vegdist(upg_nutrients2, method = "bray")
#make heirarchical clustering tree object
pc <- hclust(pc_upg)
Any help would be much appreciated.