Hi
I am trying to make installation of packages possible on an RStudio Server for individual users, but I am stuck. Everything compiles, but than I get the following message:
> install.packages("storr")
Installing package into ‘/home_rstudio/rainer/R/x86_64-pc-linux-gnu-library/4.1’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/storr_1.2.5.tar.gz'
Content type 'application/x-gzip' length 92403 bytes (90 KB)
==================================================
downloaded 90 KB
* installing *source* package ‘storr’ ...
** package ‘storr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -std=gnu11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-i2PIHO/r-base-4.1.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c storr.c -o storr.o
gcc -std=gnu99 -std=gnu11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o storr.so storr.o -L/usr/lib/R/lib -lR
installing to /home_rstudio/rainer/R/x86_64-pc-linux-gnu-library/4.1/00LOCK-storr/00new/storr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘storr’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/home_rstudio/rainer/R/x86_64-pc-linux-gnu-library/4.1/00LOCK-storr/00new/storr/libs/storr.so':
/home_rstudio/rainer/R/x86_64-pc-linux-gnu-library/4.1/00LOCK-storr/00new/storr/libs/storr.so: failed to map segment from shared object
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/home_rstudio/rainer/R/x86_64-pc-linux-gnu-library/4.1/storr’
Warning in install.packages :
installation of package ‘storr’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp2vHwKE/downloaded_packages’
>
I do not have a clue how I can fix this, and the same error also comes for other packages. Am I missing a system package?
Thanks,
Rainer