I'm not sure what is causing this to happen - I'm guessing it's some sort of encoding issue. All text from ggplot is printed as special characters (?).
x <- data.frame(
stringsAsFactors = FALSE,
Individual = c("GW14","GW14","GW14",
"GW17","GW17","GW17","GW17","GW17","GW18","GW18",
"GW18","GW18","GW18","GW18_2","GW18_2","GW18_2",
"GW18_2","GW18_2","GW19","GW19","GW19","GW19",
"GW19","GW19","GW20","GW20","GW20","GW20",
"GW20_31","GW20_31","GW20_31","GW20_31","GW20_34",
"GW20_34","GW20_34","GW20_34","GW22","GW22","GW22",
"GW22","GW22","GW22T","GW22T","GW22T","GW22T",
"GW25","GW25","GW25","GW25","GW25"),
Area = c("motor","somatosensory",
"V1","motor","parietal","PFC","somatosensory",
"V1","motor","parietal","PFC","temporal","V1",
"motor","parietal","somatosensory","temporal","V1",
"motor","parietal","PFC","somatosensory","temporal",
"V1","motor","PFC","somatosensory","V1",
"parietal","PFC","temporal","V1","motor","parietal",
"PFC","V1","motor","parietal","PFC","somatosensory",
"V1","motor","parietal","PFC","somatosensory",
"motor","parietal","PFC","somatosensory","temporal"),
n = c(530L,5329L,1913L,1210L,
11L,935L,155L,1125L,13312L,2206L,11863L,2358L,
9533L,8476L,12826L,6033L,13817L,7467L,7013L,
5824L,7017L,4402L,6812L,5599L,3256L,3851L,4439L,
8216L,2844L,6371L,4658L,3598L,24L,8174L,7192L,
6327L,3169L,1975L,5377L,4152L,1931L,2418L,
2415L,32L,2946L,1923L,22743L,20608L,5956L,1033L)
)
> ggplot(x) + geom_point(aes(x = Area, y = Individual, size = n))
Warning message:
In readChar(file, size, TRUE) : truncating string with embedded nuls
> sessionInfo
R version 4.0.2 (2020-06-22)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Arch Linux
Matrix products: default
BLAS: /usr/lib/libblas.so.3.9.0
LAPACK: /usr/lib/liblapack.so.3.9.0
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8
[6] LC_MESSAGES=en_US.UTF-8 LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] forcats_0.5.0 stringr_1.4.0 purrr_0.3.4 readr_1.3.1 tidyr_1.1.0 tibble_3.0.1 ggplot2_3.3.2 tidyverse_1.3.0
[9] dplyr_1.0.0
loaded via a namespace (and not attached):
[1] nlme_3.1-148 fs_1.4.1 reactable_0.2.0 lubridate_1.7.8 RcppAnnoy_0.0.16 RColorBrewer_1.1-2 httr_1.4.1
[8] sctransform_0.2.1 tools_4.0.2 backports_1.1.8 R6_2.4.1 irlba_2.3.3 KernSmooth_2.23-17 uwot_0.1.8
[15] DBI_1.1.0 lazyeval_0.2.2 colorspace_1.4-1 withr_2.2.0 tidyselect_1.1.0 gridExtra_2.3 compiler_4.0.2
[22] rvest_0.3.5 cli_2.0.2 xml2_1.3.2 plotly_4.9.2.1 labeling_0.3 Seurat_3.1.5.9009 scales_1.1.1
[29] lmtest_0.9-37 ggridges_0.5.2 pbapply_1.4-2 rappdirs_0.3.1 digest_0.6.25 rmarkdown_2.1 base64enc_0.1-3
[36] pkgconfig_2.0.3 htmltools_0.5.0 dbplyr_1.4.4 readxl_1.3.1 htmlwidgets_1.5.1 rlang_0.4.6 rstudioapi_0.11
[43] farver_2.0.3 generics_0.0.2 zoo_1.8-8 jsonlite_1.7.0 ica_1.0-2 magrittr_1.5 patchwork_1.0.1
[50] Matrix_1.2-18 Rcpp_1.0.4.6 munsell_0.5.0 fansi_0.4.1 ape_5.4 reticulate_1.16 lifecycle_0.2.0
[57] stringi_1.4.6 MASS_7.3-51.6 Rtsne_0.15 plyr_1.8.6 grid_4.0.2 blob_1.2.1 parallel_4.0.2
[64] listenv_0.8.0 ggrepel_0.8.2 crayon_1.3.4 lattice_0.20-41 haven_2.3.1 cowplot_1.0.0 splines_4.0.2
[71] hms_0.5.3 knitr_1.28 pillar_1.4.4 igraph_1.2.5 future.apply_1.6.0 reshape2_1.4.4 codetools_0.2-16
[78] leiden_0.3.3 reprex_0.3.0 glue_1.4.1 packrat_0.5.0 evaluate_0.14 modelr_0.1.8 data.table_1.12.8
[85] png_0.1-7 vctrs_0.3.1 cellranger_1.1.0 gtable_0.3.0 RANN_2.6.1 future_1.17.0 assertthat_0.2.1
[92] xfun_0.14 rsvd_1.0.3 broom_0.5.6 rsconnect_0.8.16 survival_3.1-12 viridisLite_0.3.0 cluster_2.1.0
[99] globals_0.12.5 fitdistrplus_1.1-1 ellipsis_0.3.1 ROCR_1.0-11
Cross-posted here:
https://stackoverflow.com/questions/62841339/ggplot-printing-all-text-as-special-characters-rectangles