Hi,
I'm trying to create a volcano plot and keep getting the same error.
I ran the following code in RStudio...
EnhancedVolcano(res, lab = rownames(res), x = 'Log2foldchange', y = 'pvalue', xlim = c(-8,8), title = 'Macrophage', pCutoff = 10e-16, FCcutoff = 1.5, pointSize = 3.0, labSize = 3.0)
And received the following error...
Error in EnhancedVolcano(toptable = data.frame(results), x = "log2fc", : log2fc is not numeric!