Installing phlyoseq package on R 4.2.2

Hi
I'm trying to install phyloseq package on R 4.2.2 but it gives me this error package ‘phyloseq’ is not available for this version of R

A version of this package for your version of R might be available elsewhere,

see the ideas at

R Installation and Administration

Can someone help me with the right package?

1 Like

HI @Hr■■■■a , you need an older RStudio version.

Im worked with different bioconductor packages and I have many problem like this. A solution was run the code in RCloud now PositCloud because I find a few libraries problems.

Is good get Rtools in R desktop.

The error message you are showing suggest you are trying to install it using install.packages(). phyloseq is not in CRAN it has to be installed from Bioconductor

if(!requireNamespace("BiocManager")){
  install.packages("BiocManager")
}
BiocManager::install("phyloseq")

you can also try via devtools and its github repository: joey711/phyloseq

devtools::install_github("joey711/phyloseq")

This topic was automatically closed 21 days after the last reply. New replies are no longer allowed.

If you have a query related to it or one of the replies, start a new topic and refer back with a link.