"Package had non-zero exit status" problem

[borodach]

Hi all! I'm new to the R and met some difficlties with installing one package from the github. I was looking for the answer, but nothing helped me.

I try to install package through devtools::install_github("statsbomb/StatsBombR"). and it looks like it works, but in the end it shows error and remove everything. I use Windows and last version of RStudio.

Here is the full code:

> devtools::install_github("statsbomb/StatsBombR", INSTALL_opts="--no-multiarch")
Downloading GitHub repo statsbomb/StatsBombR@master
Downloading git repo https://github.com/cran/SDMTools.git
√  checking for file 'C:\Users\Golovach Andrew\AppData\Local\Temp\RtmpkFdb0E\file37503a1121e9/DESCRIPTION' (603ms)
-  preparing 'SDMTools': (690ms)
√  checking DESCRIPTION meta-information ... 
-  cleaning src
-  checking for LF line-endings in source and make files and shell scripts (598ms)
-  checking for empty or unneeded directories
-  building 'SDMTools_1.1-221.2.tar.gz'
   
Installing package into ‘C:/Users/Golovach Andrew/Documents/R/win-library/3.6’
(as ‘lib’ is unspecified)
* installing *source* package 'SDMTools' ...
** using staged installation
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c ConnectedComponentLabelling.c -o ConnectedComponentLabelling.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c getmin.c -o getmin.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c movewindow.c -o movewindow.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c patchstats.c -o patchstats.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c pointinpolygon.c -o pointinpolygon.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c slope.aspect.c -o slope.aspect.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c vincenty.geodesics.c -o vincenty.geodesics.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/PROGRA~1/R/R-36~1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mtune=generic -c writeasciidata.c -o writeasciidata.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o SDMTools.dll tmp.def ConnectedComponentLabelling.o getmin.o movewindow.o patchstats.o pointinpolygon.o slope.aspect.o vincenty.geodesics.o writeasciidata.o -LC:/PROGRA~1/R/R-36~1.2/bin/x64 -lR
installing to C:/Users/Golovach Andrew/Documents/R/win-library/3.6/00LOCK-SDMTools/00new/SDMTools/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SDMTools'
    finding HTML links ... готово
    COGravity                               html  
    ClassStat                               html  
    ConnCompLabel                           html  
    Istat                                   html  
    Kappa                                   html  
    PatchStat                               html  
    Scalebar                                html  
    SigDiff                                 html  
    ZonalStat                               html  
    accuracy                                html  
    asc.from.raster                         html  
    asc2dataframe                           html  
    auc                                     html  
    circular.averaging                      html  
    compare.matrix                          html  
    confusion.matrix                        html  
    destination                             html  
    distance                                html  
    extract.data                            html  
    getXYcoords                             html  
    grid.area                               html  
    grid.info                               html  
    lcmw                                    html  
    legend.gradient                         html  
    omission                                html  
    optim.thresh                            html  
    pnt.in.poly                             html  
    put.data                                html  
    quick.map                               html  
    read.asc                                html  
    slope                                   html  
    wt.mean                                 html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SDMTools)
Downloading git repo https://github.com/cran/SDMTools.git
Skipping SDMTools, it is already being installed
√  checking for file 'C:\Users\Golovach Andrew\AppData\Local\Temp\RtmpkFdb0E\remotes37502c1c4c88\statsbomb-StatsBombR-fc283e4/DESCRIPTION' (718ms)
-  preparing 'StatsBombR': (554ms)
√  checking DESCRIPTION meta-information ... 
-  checking for LF line-endings in source and make files and shell scripts (468ms)
-  checking for empty or unneeded directories
-  building 'StatsBombR_0.1.0.tar.gz'
   
Installing package into ‘C:/Users/Golovach Andrew/Documents/R/win-library/3.6’
(as ‘lib’ is unspecified)
* installing *source* package 'StatsBombR' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Ошибка: (конвертировано из предупреждения) пакет 'dplyr' был собран под R версии 3.6.3
Выполнение остановлено
ERROR: lazy loading failed for package 'StatsBombR'
* removing 'C:/Users/Golovach Andrew/Documents/R/win-library/3.6/StatsBombR'
Ошибка: Failed to install 'StatsBombR' from GitHub:
  (конвертировано из предупреждения) installation of package ‘C:/Users/GOLOVA~1/AppData/Local/Temp/RtmpkFdb0E/file375023623d19/StatsBombR_0.1.0.tar.gz’ had non-zero exit status

Any help will be appreciated!

[andresrcs]

Can you please translate the error messages?

[borodach]

@borodach

Ошибка: (конвертировано из предупреждения) пакет 'dplyr' был собран под R версии 3.6.3 Выполнение остановлено

yeah, sorry for this)

Error: (converted from warning) package 'dplyr' was built under R version 3.6.3
Execution stopped
ERROR: lazy loading failed for package 'StatsBombR'
* removing 'C: / Users / Golovach Andrew / Documents / R / win-library / 3.6 / StatsBombR'
Error: Failed to install 'StatsBombR' from GitHub:
   (converted from warning) installation of package ‘C: /Users/GOLOVA~1/AppData/Local/Temp/RtmpkFdb0E/file375023623d19/StatsBombR_0.1.0.tar.gz’ had non-zero exit status

[andresrcs]

Try running this code before installing the package

Sys.setenv(R_REMOTES_NO_ERRORS_FROM_WARNINGS="true")

[borodach]

It works perfectly! Thanks a lot! Can you say in few words - what does this line make? Like the system must ignore warnings?

[andresrcs]

It tells the remotes package not to treat warnings as errors and keep working instead of breaking execution.

[borodach]

ok. thanks again for your help!

[andresrcs]

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