Im doing a class assignment and have an R notebook which I need to knit to HTML. I always knitted with the button and it always worked fine until now.
#Loading package and files
EPlinks <- GRanges(all_links.xlsx)
Linked_gene <- GRanges(genes_linked)
TADcalls_HepG2 <- GRanges(HepG2_ENCODE3_raw_domains)
TADcalls_GM12878 <- GRanges(GM12878_Rao_2014_raw_TADs)
TADcalls_Pan <- GRanges(Pancreas_Schmitt2016_raw_TADs)
those are the first code lines, and this is the error im getting:
I already updated R, RStudio and the different packages and nothing seems to work.
Thanks in advance for any help!