I have a Github Action (slightly modified check-standard.yaml
from r-lib/actions
) that is failing when trying to install a package dependency from Bioconductor (Biobase
) during the development run of the checks (R-devel
), which is currently R 4.2
. I am getting the error:
Bioconductor does not yet build and check packages for R version 4.2
I have set up a GitHub repository that replicates the issue here:
https://github.com/stufield/bioc-devel-actions
From the website and the Bioconductor installation instructions here:
it looks like this may not be possible from mid-April to mid-October, after which the Bioconductor development cycle catches up to the R-devel
in mid-October. However, my intuition tells me it should be possible to install a dev version of Biobase
in a R-devel
environment.
I could simply disable the check for R-devel
, but this does not feel like a satisfying solution.
Any suggestions?
Thanks in advance,
Stu