I want to use Shiny within RMarkdown for users to upload data (xlsx file).
Then I want to pass all the worksheets as R data frames (w/o reactivity) to run rest of the RMarkdown file.
I mainly want to convert them into data frames so I can use reticulate
to run Python code as well.
I've tried this, and it doesn't seem to quite work:
library(dplyr)
library(miniUI)
library(shiny)
library(XLConnect)
launch_shiny <- function() {
ui <- miniPage(
gadgetTitleBar("Input Data"),
miniContentPanel(
fileInput(inputId = "my.file", label = NULL, multiple = FALSE)
)
)
server <- function(input, output, session) {
wb <- reactive({
new.file <- input$my.file
loadWorkbook(
filename = new.file$datapath,
create = FALSE,
password = NULL
)
})
observeEvent(input$done, {
stopApp(c(wb()))
})
}
runGadget(ui, server)
}
test <- launch_shiny()
df1 <- readWorksheet(object = test, sheet = "sheet1")
df2 <- readWorksheet(object = test, sheet = "sheet2")
It throws this error:
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function ‘readWorksheet’ for signature ‘"list", "character"’
I can return one sheet at a time using stopApp(readWorksheet(object = wb(), sheet = "sheet1"))
, but I can't seem to return an entire workbook or multiple data frames at the same time.
I don't really want to read in xlsx, save each sheet as csv in working directory, then read those files in again.
Would anyone have a good suggestion on how to get around this?