I have downloaded everything that external websites have told me to download for affylmGUI to work but I keep getting the same error when I try to run it. I have copied the packages I have downloaded below and the error I get.
> sessionInfo() R version 4.0.2 (2020-06-22) Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS High Sierra 10.13.6 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib locale:  en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8 attached base packages:  stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached):  tkrplot_0.0-24 codetools_0.2-16 IRanges_2.22.2 Biostrings_2.56.0 crayon_1.3.4 xtable_1.8-4 affy_1.66.0  stats4_4.0.2 zlibbioc_1.34.0 XVector_0.28.0 affyio_1.58.0 limma_3.44.3 S4Vectors_0.26.1 preprocessCore_1.50.0  splines_4.0.2 gcrma_2.60.0 affyPLM_1.64.0 Biobase_2.48.0 affylmGUI_1.62.0 parallel_4.0.2 compiler_4.0.2  BiocGenerics_0.34.0 BiocManager_1.30.10 R2HTML_2.3.2 tcltk_4.0.2 > library(affylmGUI) To begin, type affylmGUI() > affylmGUI() Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") : [tcl] invalid command name "tk_messageBox".
Am I missing any packages potentially? If anyone could help me understand this error that would be great!